Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925547.1_cds_XP_016473767.1_65866
CDS Infomation

[gene=LOC107795620] [db_xref=GeneID:107795620] [protein=glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like] [protein_id=XP_016473767.1] [location=complement(join(73319..73544,73646..73842,73942..74319,74410..74469,75070..75251,75337..75433))] [gbkey=CDS]
Sequence

ATGGCTCTTAAAGCCGTTCATGTTTCTGATGTTCCCAATTTAGATCAAGTCCCTGAGAAA
CCTTCTCTAGCTCTCTATTCCACCCGCTTCTCTCAAGGGGTTGAAATTGGAAGAACATCG
TTCAAGCCATCGAATTTTTTAGTCGTTGGCCATAGAGGGAACGGGATGAATTTGTTGCAG
TCTTCTGACCGGAGAATGAAGGCTGTTAAGGAAAATTCAATTCTTTCATTCAATTCAGCT
GCTAATTACCCCATCGATTTTATCGAGTTTGACGTTCAGGTGACAAAGGATGATTGCCCC
ATCATTTTTCACGACAACTTCATCCTCACTCAAGAAAATGGTACAATCTATGAAAGAAGA
GTAACCGAATTGACGGTTGCTGAATTTCTTAGCTATGGACCTCAAAAGGAAGAGAGTGTC
ACTGGAAAACCTTTACTGAGGAAAACAAAAGATGGAAAGATTGTTAGCTGGACAGTTGAA
ACGGATGATTCAGTGTGTACCTTAAAAGAAGCCTTTGAGAAAGTGAACGCTTCTATTGGC
TTCAACATCGAACTCAAATTTGATGACCACATTGTTTATGAGCAAGACTACCTCGTCCGC
GTTCTTCAAGCCATTTTACATGTTATCTCAGAGCACGCTAAAGGCAGACCAATTATCTTC
TCAAGTTTCCAGCCTGATGCTGCTCTGCTTGTCAAGAAACTCCAGACTGCTTACCCTGTA
TTTTTCCTCACAAATGGAGGAACAGAAATTTACTATGATGTTAGAAGGAACTCATTGGAG
GAGGCCACTAAACTGTGTTTAGAGGGTGGTCTTGAAGGGATTGTTTCAGAAGTCAAAGGA
ATCTTTAGGAATCCAGGAGCAGTTAACAAGATCAAAGGGTCTAAGCTCTCTCTTATGACA
TATGGCAAATTGAATAACGTGCCTGAAGCTGTGTATATGCAACATCTGATGGGAATAGAT
GGGGTGATTGTGGATTTGGTTCAAGAAATAACAGAGGCTGTGAGTAACCTAGTGAAGAAG
CCTGAGGAGGTTGAAGATGAGATTTTGCTGGAAGGGGAGGAGAAAGTTCAAAATAGACCT
CAATTCTCACAAAGGGAATTGTCTTTTCTTCTCAAGCTTATCCCCGAATTGATACAATAA

Peptide Sequence

PEP ID

XP_016473767.1
PEP Infomation

PREDICTED: glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like [Nicotiana tabacum]
Sequence

MALKAVHVSDVPNLDQVPEKPSLALYSTRFSQGVEIGRTSFKPSNFLVVGHRGNGMNLLQ
SSDRRMKAVKENSILSFNSAANYPIDFIEFDVQVTKDDCPIIFHDNFILTQENGTIYERR
VTELTVAEFLSYGPQKEESVTGKPLLRKTKDGKIVSWTVETDDSVCTLKEAFEKVNASIG
FNIELKFDDHIVYEQDYLVRVLQAILHVISEHAKGRPIIFSSFQPDAALLVKKLQTAYPV
FFLTNGGTEIYYDVRRNSLEEATKLCLEGGLEGIVSEVKGIFRNPGAVNKIKGSKLSLMT
YGKLNNVPEAVYMQHLMGIDGVIVDLVQEITEAVSNLVKKPEEVEDEILLEGEEKVQNRP
QFSQRELSFLLKLIPELIQ

Transcript Sequence

Gene sequence data has not been registered.